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Nondestructive X-ray tomography of brain tissue ultrastructure

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posted on 2025-12-11, 14:23 authored by Carles Bosch, Tomas Aidukas, Mirko Holler, Alexandra Pacureanu, Elisabeth Müller, Christopher J Peddie, Yuxin Zhang, Phil Cook, Lucy Collinson, Oliver Bunk, Andreas Menzel, Manuel Guizar-Sicairos, Gabriel Aeppli, Ana Diaz, Adrian A Wanner, Andreas T Schaefer
Maps of biological tissues at subcellular detail are key for understanding how organs function. X-ray nanotomography is a promising alternative to volume electron microscopy: it has the potential to nondestructively image millimeter-sized samples at ultrastructural resolution within a few days. A fundamental barrier is that the intense X-rays required for imaging also deform and disintegrate the tissue samples. Here we show a combination of solutions that overcome this barrier: We used a cryogenic and stable sample stage, tailored nonrigid tomographic reconstruction algorithms and an epoxy resin developed for the nuclear and aerospace industry. Tissue samples were resistant to radiation doses exceeding 1.15 × 10¹⁰ Gy, and sub-40 nm isotropic resolution allowed identifying axon bundles, dendrites and synapses in mouse brain tissue without physical sectioning. Using volume electron microscopy, we demonstrate that tissue ultrastructure remains intact after X-ray imaging. Together, this unlocks the potential of X-ray tomography for high-resolution tissue imaging.

Funding

Wellcome Trust (Grant ID: CC2036) Wellcome Trust (Wellcome) (Grant ID: 110174/Z/15/Z) Wellcome Trust (Wellcome) (Grant ID: EP/W024292/1) Wellcome Trust (Wellcome) (Grant ID: CC1076) Cancer Research UK (CRUK) (Grant ID: CC1076) RCUK | Medical Research Council (MRC) (Grant ID: CC1076) RCUK | Engineering and Physical Sciences Research Council (EPSRC) (Grant ID: EP/W024292/1) Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (Swiss National Science Foundation) (Grant ID: 200021_196898) EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) (Grant ID: 852455) Federal Department of Economic Affairs, Education and Research, Switzerland | Staatssekretariat für Bildung, Forschung und Innovation (State Secretariat for Education, Research and Innovation) (Grant ID: MB22.00042) Wellcome Trust (Grant ID: CC2036) Wellcome Trust (Grant ID: CC2036) Wellcome Trust (Grant ID: CC2036) Crick (Grant ID: CC1076, Grant title: STP Electron Microscopy) Crick (Grant ID: CC2036, Grant title: Schaefer CC2036) Engineering and Physical Sciences Research Council (Grant ID: EP/W024292/1, Grant title: EPSRC EP/W024292/1)

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