The tuberculosis necrotizing toxin is an NAD+ and NADP+ glycohydrolase with distinct enzymatic properties
Uday Tak
Jiri Vlach
Acely Garza-Garcia
Doreen William
Olga Danilchanka
Luiz Pedro Sório de Carvalho
Jamil S Saad
Michael Niederweis
10779/crick.11409831.v1
https://crick.figshare.com/articles/journal_contribution/The_tuberculosis_necrotizing_toxin_is_an_NAD_and_NADP_glycohydrolase_with_distinct_enzymatic_properties/11409831
Upon host infection, Mycobacterium tuberculosis secretes the tuberculosis necrotizing toxin (TNT) into the cytosol of infected macrophages, leading to host cell death by necroptosis. TNT hydrolyzes NAD+ in the absence of any exogenous cofactor, thus classifying it as a β-NAD+ glycohydrolase. However, TNT lacks sequence similarity with other NAD+ hydrolyzing enzymes and lacks the essential motifs involved in NAD+ binding and hydrolysis by these enzymes. In this study, we used NMR to examine the enzymatic activity of TNT and found that TNT hydrolyzes NADP+ as fast as NAD+ but does not cleave the corresponding reduced dinucleotides. This activity of TNT was not inhibited by ADP-ribose or nicotinamide, indicating low affinity of TNT for these reaction products. A selection assay for nontoxic TNT variants in Escherichia coli identified four of six residues in the predicted NAD+-binding pocket and four glycine residues that form a cradle directly below the NAD+-binding site, a conserved feature in the TNT protein family. Site-directed mutagenesis of residues near the predicted NAD+-binding site revealed that Phe727, Arg757, and Arg780 are essential for NAD+ hydrolysis by TNT. These results identify the NAD+-binding site of TNT. Our findings also show that TNT is an NAD+ glycohydrolase with properties distinct from those of other bacterial glycohydrolases. Because many of these residues are conserved within the TNT family, our findings provide insights into understanding the function of the >300 TNT homologs.
2019-12-19 16:20:02
bacterial toxin
enzyme kinetics
enzyme mechanism
host-pathogen interaction
tuberculosis
Amino Acid Sequence
Bacterial Toxins
Hydrolysis
Intracellular Space
Models, Molecular
Mycobacterium tuberculosis
NAD
NAD+ Nucleosidase
NADP
Protein Conformation
Protein Domains
Carvalho FC001060
06 Biological Sciences
11 Medical and Health Sciences
03 Chemical Sciences
Biochemistry & Molecular Biology